| Discovery and Enzymatic Screening of Genome-Mined Microbial Levanases to Produce Second-Generation beta-(2,6)-Fructooligosaccharides: Catalytic Properties | Chen L, Hill A, Petit JL, Mariage A, de Berardinis V and Karboune S | |  | | In vitro Applications of the Terpene Mini-Path 2.0 | Couillaud J, Amouric A, Courvoisier-Dezord E, Leydet L, Schweitzer N, Rosso MN, Hage H, Loussouarn-Yvon M, Vincentelli R, Petit JL, de Berardinis V, Attolini M, Maresca M, Duquesne K and Iacazio G | | | | Fluorescence Detection of the Persistent Organic Pollutant Chlordecone in Water at Environmental Concentrations | Della-Negra O, Kouassi AE, Dutasta JP, Saaidi PL and Martinez A | | | | Is a dissipation half-life of 5 years for chlordecone in soils of the French West Indies relevant? | Saaidi PL, Grunberger O, Samouelian A, Le Roux Y, Richard A, Devault DA, Feidt C, Benoit P, Evrard O, Imfeld G, Mouvet C and Voltz M | | | | In vitro Applications of the Terpene Mini-Path 2.0 | Couillaud J, Amouric A, Courvoisier-Dezord E, Leydet L, Schweitzer N, Rosso MN, Hage H, Loussouarn-Yvon M, Vincentelli R, Petit JL, de Berardinis V, Attolini M, Maresca M, Duquesne K and Iacazio G | | | | Access to the Syn diastereomers of cryptophane cages using HFIP | Della-Negra O, Cirillo Y, Brotin T, Dutasta JP, Saaidi PL, Chatelet B and Martinez A | | | | Genetic and biocatalytic basis of formate dependent growth of Escherichia coli strains evolved in continuous culture | Delmas VA, Perchat N, Monet O, Foure M, Darii E, Roche D, Dubois I, Pateau E, Perret A, Doring V and Bouzon M | | | | Photobiocatalytic Oxyfunctionalization with High Reaction Rate using a Baeyer-Villiger Monooxygenase from Burkholderia xenovorans in Metabolically Engineered Cyanobacteria | Erdem E, Malihan-Yap L, Assil-Companioni L, Grimm H, Barone GD, Serveau-Avesque C, Amouric A, Duquesne K, de Berardinis V, Allahverdiyeva Y, Alphand V and Kourist R | | | | Genome-Wide TSS Distribution in Three Related Clostridia with Normalized Capp-Switch Sequencing | Hocq R, Jagtap S, Boutard M, Tolonen AC, Duval L, Pirayre A, Ferreira NL and Wasels F | | | | Pyruvate kinase, a metabolic sensor powering glycolysis, drives the metabolic control of DNA replication | Horemans S, Pitoulias M, Holland A, Pateau E, Lechaplais C, Ekaterina D, Perret A, Soultanas P and Janniere L | | | | Genes and enzymes involved in the biodegradation of the quaternary carbon compound pivalate in the denitrifying Thauera humireducens strain PIV-1 | Jacoby C, Ebenau-Jehle C, Saum K, Jehmlich N, von Bergen M, Bruls T and Boll M | | | | Characterization of a novel beta-alanine biosynthetic pathway consisting of promiscuous metabolic enzymes | Perchat N, Dubois C, Mor-Gautier R, Duquesne S, Lechaplais C, Roche D, Fouteau S, Darii E and Perret A | | | | Rapid identification of methylase specificity (RIMS-seq) jointly identifies methylated motifs and generates shotgun sequencing of bacterial genomes | Baum C, Lin YC, Fomenkov A, Anton BP, Chen LX, Yan B, Evans TC, Roberts RJ, Tolonen AC and Ettwiller L | | | | Purification and Characterization of Nit, a Robust Thermostable Nitrilase From Parabukholderia phymatum | Bessonnet T, Mariage A, Petit JL, Pellouin V, Debard A, Zaparucha A, Vergne-Vaxelaire C and de Berardinis V | | | | Change in Cofactor Specificity of Oxidoreductases by Adaptive Evolution of an Escherichia coli NADPH-Auxotrophic Strain | Bouzon M, Doring V, Dubois I, Berger A, Stoffel GMM, Ramirez LC, Meyer SN, Foure M, Roche D, Perret A, Erb TJ, Bar-Even A and Lindner SN | | | | Editorial: Synthetic Microbial Ecology | Bruls T, Baumdicker F and Smidt H | | | | Sequence-independent RNA sensing and DNA targeting by a split domain CRISPR-Cas12a gRNA switch | Collins SP, Rostain W, Liao CY and Beisel CL | | | | First Direct Evidence of Interpartner Hydride/Deuteride Exchanges for Stored Sodiated Arginine/Fructose-6-phosphate Complex Anions within Salt-Solvated Structures | Darii E, Gimbert Y, Alves S, Damont A, Perret A, Woods AS, Fenaille F and Tabet JC | | | | One Step Forward in Exploration of Class II Pyruvate Aldolases Nucleophile and Electrophile Substrate Specificity | Gastaldi C, Tagne RN, Laurent V, Helaine V, Petit JL, Traikia M, de Berardinis V, Lemaire M and Guerard-Helaine C | | | | Microbial Transformation of Chlordecone and Two Transformation Products Formed During in situ Chemical Reduction | Hellal J, Saaidi PL, Bristeau S, Crampon M, Muselet D, Della-Negra O, Mauffret A, Mouvet C and Joulian C | | | | A zero inflated log-normal model for inference of sparse microbial association networks | Prost V, Gazut S and Bruls T | | | | Real-time SARS-CoV-2 diagnostic and variants tracking over multiple candidates using nanopore DNA sequencing | Studer F, Petit JL, Engelen S and Mendoza-Parra MA | | | | Nondestructive enzymatic deamination enables single-molecule long-read amplicon sequencing for the determination of 5-methylcytosine and 5-hydroxymethylcytosine at single-base resolution | Sun ZY, Vaisvila R, Hussong LM, Yan B, Baum C, Saleh L, Samaranayake M, Guan SX, Dai N, Correa IR, Pradhan S, Davis TB, Evans TC and Ettwiller LM | | | | Nitrilase immobilization and transposition from a micro-scale batch to a continuous process increase the nicotinic acid productivity | Teepakorn C, Zajkoska P, Cwicklinski G, De Berardinis V, Zaparucha A, Nonglaton G and Anxionnaz-Minvielle Z | | | | Genetic Analysis of Citrobacter sp.86 Reveals Involvement of Corrinoids in Chlordecone and Lindane Biotransformations | Barbance A, Della-Negra O, Chaussonnerie S, Delmas V, Muselet D, Ugarte E, Saaidi PL, Weissenbach J, Fischer C, Le Paslier D and Fonknechten N | | | | Transformation of the recalcitrant pesticide chlordecone by Desulfovibrio sp.86 with a switch from ring-opening dechlorination to reductive sulfidation activity | Della-Negra O, Chaussonnerie S, Fonknechten N, Barbance A, Muselet D, Martin DE, Fouteau S, Fischer C, Saaidi PL and Le Paslier D | | | | Channeling C1 Metabolism toward S-Adenosylmethionine-Dependent Conversion of Estrogens to Androgens in Estrogen-Degrading Bacteria | Jacoby C, Krull J, Andexer J, Jehmlich N, von Bergen M, Bruls T and Boll M | | | | Binning unassembled short reads based on k-mer abundance covariance using sparse coding | Kyrgyzov O, Prost V, Gazut S, Farcy B and Bruls T | | | | Pyruvate Aldolases Catalyze Cross-Aldol Reactions between Ketones: Highly Selective Access to Multi-Functionalized Tertiary Alcohols | Laurent V, Gourbeyre L, Uzel A, Helaine V, Nauton L, Traikia M, de Berardinis V, Salanoubat M, Gefflaut T, Lemaire M and Guerard-Helaine C | | | | The class II benzoyl-coenzyme A reductase complex from the sulfate-reducing Desulfosarcina cetonica | Anselmann SEL, Loffler C, Stark HJ, Jehmlich N, von Bergen M, Bruls T and Boll M | | | | Characterization of L-Carnitine Metabolism in Sinorhizobium meliloti | Bazire P, Perchat N, Darii E, Lechaplais C, Salanoubat M and Perret A | | | | Continuous Culture Adaptation of Methylobacterium extorquens AM1 and TK 0001 to Very High Methanol Concentrations | Belkhelfa S, Roche D, Dubois I, Berger A, Delmas VA, Cattolico L, Perret A, Labadie K, Perdereau AC, Darii E, Pateau E, de Berardinis V, Salanoubat M, Bouzon M and Doring V | | | | ABC Transporters Required for Hexose Uptake by Clostridium phytofermentans | Cerisy T, Iglesias A, Rostain W, Boutard M, Pelle C, Perret A, Salanoubat M, Fierobe HP and Tolonen AC | | | | A Targetron-Recombinase System for Large-Scale Genome Engineering of Clostridia | Cerisy T, Rostain W, Chhun A, Boutard M, Salanoubat M and Tolonen AC | | | | 2-Deoxyribose-5-phosphate aldolase, a remarkably tolerant aldolase towards nucleophile substrates | Chambre D, Guerard-Helaine C, Darii E, Mariage A, Petit JL, Salanoubat M, de Berardinis V, Lemaire M and Helaine V | | | | Natural Chlordecone Degradation Revealed by Numerous Transformation Products Characterized in Key French West Indies Environmental Compartments | Chevallier ML, Della-Negra O, Chaussonnerie S, Barbance A, Muselet D, Lagarde F, Darii E, Ugarte E, Lescop E, Fonknechten N, Weissenbach J, Woignier T, Gallard JF, Vuilleumier S, Imfeld G, Le Paslier D and Saaidi PL | | | | Metabolic reconstruction of the genome of candidate Desulfatiglans TRIP_1 and identification of key candidate enzymes for anaerobic phenanthrene degradation | Kraiselburd I, Bruls T, Heilmann G, Kaschani F, Kaiser M and Meckenstock RU | | | | Achiral Hydroxypyruvaldehyde Phosphate as a Platform for Multi-Aldolases Cascade Synthesis of Diuloses and for a Quadruple Acetaldehyde Addition Catalyzed by 2-Deoxyribose-5-Phosphate Aldolases | Laurent V, Helaine V, Vergne-Vaxelaire C, Nauton L, Traikia M, Petit JL, Salanoubat M, de Berardinis V, Lemaire M and Guerard-Helaine C | | | | Exploration of Aldol Reactions Catalyzed by Stereoselective Pyruvate Aldolases with 2-Oxobutyric Acid as Nucleophile | Laurent V, Uzel A, Helaine V, Nauton L, Traikia M, Gefflaut T, Salanoubat M, de Berardinis V, Lemaire M and Guerard-Helaine C | | | | Recognition of the persistent organic pollutant chlordecone by a hemicryptophane cage | Long A, Lefevre S, Guy L, Robert V, Dutasta JP, Chevallier ML, Della-Negra O, Saaidi PL and Martinez A | | | | A family of native amine dehydrogenases for the asymmetric reductive amination of ketones | Mayol O, Bastard K, Beloti L, Frese A, Turkenburg JP, Petit JL, Mariage A, Debard A, Pellouin V, Perret A, de Berardinis V, Zaparucha A, Grogan G and Vergne-Vaxelaire C | | | | Exploring natural biodiversity to expand access to microbial terpene synthesis | Rico J, Duquesne K, Petit JL, Mariage A, Darii E, Peruch F, de Berardinis V and Iacazio G | | | | De novo structure determination of 3-((3-aminopropyl)amino)-4-hydroxybenzoic acid, a novel and abundant metabolite in Acinetobacter baylyi ADP1 | Thomas M, Stuani L, Darii E, Lechaplais C, Pateau E, Tabet JC, Salanoubat M, Saaidi PL and Perret A | | | | Complete Genome Sequence of the Facultative Methylotroph Methylobacterium extorquens TK 0001 Isolated from Soil in Poland | Belkhelfa S, Labadie K, Cruaud C, Aury J-M, Roche D, Bouzon M, Salanoubat M and Doring V | | | | Fermentative Spirochaetes mediate necromass recycling in anoxic hydrocarbon-contaminated habitats | Dong XY, Greening C, Bruls T, Conrad R, Guo K, Blaskowski S, Kaschani F, Kaiser M, Abu Lain N and Meckenstock RU | | | | Screening and Characterization of Novel Polyesterases from Environmental Metagenomes with High Hydrolytic Activity against Synthetic Polyesters | Hajighasemi M, Tchigvintsev A, Nocek B, Flick R, Popovic A, Hai T, Khusnutdinova AN, Brown G, Xu XH, Cui H, Anstett J, Chernikova TN, Bruls T, Le Paslier D, Yakimov MM, Joachimiak A, Golyshina OV, Savchenko A, Golyshin PN, Edwards EA and Yakunin AF | | | | Anaerobic degradation of phenanthrene by a sulfate-reducing enrichment culture | Himmelberg AM, Bruls T, Farmani Z, Weyrauch P, Barthel G, Schrader W and Meckenstock RU | | | | Shared Nearest Neighbor Clustering in a Locality Sensitive Hashing Framework | Kanj S, Bruls T and Gazut S | | | | Synthesis of Branched-Chain Sugars with a DHAP-Dependent Aldolase: Ketones are Electrophile Substrates of Rhamnulose-1-phosphate Aldolases | Laurent V, Darii E, Aujon A, Debacker M, Petit JL, Helaine V, Liptaj T, Breza M, Mariage A, Nauton L, Traikia M, Salanoubat M, Lemaire M, Guerard-Helaine C and de Berardinis V | | | | Elucidation of the trigonelline degradation pathway reveals previously undescribed enzymes and metabolites | Perchat N, Saaidi PL, Darii E, Pelle C, Petit JL, Besnard-Gonnet M, de Berardinis V, Dupont M, Gimbernat A, Salanoubat M, Fischer C and Perret A | | | | Single-cell genomics of multiple uncultured stramenopiles reveals underestimated functional diversity across oceans | Seeleuthner Y, Mondy S, Lombard V, Carradec Q, Pelletier E, Wessner M, Leconte J, Mangot JF, Poulain J, Labadie K, Logares R, Sunagawa S, de Berardinis V, Salanoubat M, Dimier C, Kandels-Lewis S, Picheral M, Searson S, Pesant S, Poulton N, Stepanauskas R, Bork P, Bowler C, Hingamp P, Sullivan MB, Iudicone D, Massana R, Aury JM, Henrissat B, Karsenti E, Jaillon O, Sieracki M, de Vargas C, Wincker P and Tara Oceans C | | | | Characterization of a thermotolerant ROK-type mannofructokinase from Streptococcus mitis: application to the synthesis of phosphorylated sugars | Vergne-Vaxelaire C, Mariage A, Petit JL, Fossey-Jouenne A, Guerard-Helaine C, Darii E, Debard A, Nepert S, Pellouin V, Lemaire M, Zaparucha A, Salanoubat M and de Berardinis V | | | | Microbial communities in pyrene amended soil-compost mixture and fertilized soil | Adam IKU, Duarte M, Pathmanathan J, Miltner A, Bruls T and Kastner M | | | | Parallel evolution of non-homologous isofunctional enzymes in methionine biosynthesis | Bastard K, Perret A, Mariage A, Bessonnet T, Pinet-Turpault A, Petit JL, Darii E, Bazire P, Vergne-Vaxelaire C, Brewee C, Debard A, Pellouin V, Besnard-Gonnet M, Artiguenave F, Medigue C, Vallenet D, Danchin A, Zaparucha A, Weissenbach J, Salanoubat M and De Berardinis V | | | | Biocatalytic Approaches towards the Synthesis of Chiral Amino Alcohols from Lysine: Cascade Reactions Combining alpha-Keto Acid Oxygenase Hydroxylation with Pyridoxal Phosphate- Dependent Decarboxylation | Baud D, Peruch O, Saaidi PL, Fossey A, Mariage A, Petit JL, Salanoubat M, Vergne-Vaxelaire C, de Berardinis V and Zaparucha A | | | | A Synthetic Alternative to Canonical One-Carbon Metabolism | Bouzon M, Perret A, Loreau O, Delmas V, Perchat N, Weissenbach J, Taran F and Marliere P | | | | Evolution of a Biomass-Fermenting Bacterium To Resist Lignin Phenolics | Cerisy T, Souterre T, Torres-Romero I, Boutard M, Dubois I, Patrouix J, Labadie K, Berrabah W, Salanoubat M, Doring V and Tolonen AC | | | | Meaning and consequence of the coexistence of competitive hydrogen bond/salt forms on the dissociation orientation of non-covalent complexes | Darii E, Alves S, Gimbert Y, Perret A and Tabet JC | | | | Expanding the reaction space of aldolases using hydroxypyruvate as a nucleophilic substrate | de Berardinis V, Guerard-Helaine C, Darii E, Bastard K, Helaine V, Mariage A, Petit JL, Poupard N, Sanchez-Moreno I, Stam M, Gefflaut T, Salanoubat M and Lemaire M | | | | Functional soil metagenomics: elucidation of polycyclic aromatic hydrocarbon degradation potential following 12 years of in situ bioremediation | Duarte M, Nielsen A, Camarinha-Silva A, Vilchez-Vargas R, Bruls T, Wos-Oxley ML, Jauregui R and Pieper DH | | | | An unusual strategy for the anoxic biodegradation of phthalate | Ebenau-Jehle C, Mergelsberg M, Fischer S, Bruls T, Jehmlich N, von Bergen M and Boll M | | | | Stereoselective synthesis of gamma-hydroxy-alpha-amino acids through aldolase-transaminase recycling cascades | Guerard-Helaine C, Heuson E, Ndiaye M, Gourbeyre L, Lemaire M, Helaine V, Charmantray F, Petit JL, Salanoubat M, de Berardinis V and Gefflaut T | | | | Activity screening of environmental metagenomic libraries reveals novel carboxylesterase families | Popovic A, Hai T, Tchigvintsev A, Hajighasemi M, Nocek B, Khusnutdinova AN, Brown G, Glinos J, Flick R, Skarina T, Chernikova TN, Yim V, Bruls T, Le Paslier D, Yakimov MM, Joachimiak A, Ferrer M, Golyshina OV, Savchenko A, Golyshin PN and Yakunin AF | | | | A spectral algorithm for fast de novo layout of uncorrected long nanopore reads | Recanati A, Bruls T and d'Aspremont A | | | | A patchwork pathway for oxygenase-independent degradation of side chain containing steroids | Warnke M, Jacoby C, Jung T, Agne M, Mergelsberg M, Starke R, Jehmlich N, von Bergen M, Richnow HH, Bruls T and Boll M | | | | Global repositioning of transcription start sites in a plant-fermenting bacterium | Boutard M, Ettwiller L, Cerisy T, Alberti A, Labadie K, Salanoubat M, Schildkraut I and Tolonen AC | | | | Microbial Degradation of a Recalcitrant Pesticide: Chlordecone | Chaussonnerie S, Saaidi PL, Ugarte E, Barbance A, Fossey A, Barbe V, Gyapay G, Bruls T, Chevalier M, Couturat L, Fouteau S, Muselet D, Pateau E, Cohen GN, Fonknechten N, Weissenbach J and Le Paslier D | | | | A scalable assembly-free variable selection algorithm for biomarker discovery from metagenomes | Gkanogiannis A, Gazut S, Salanoubat M, Kanj S and Bruls T | | | | Asymmetric reductive amination by a wild-type amine dehydrogenase from the thermophilic bacteria Petrotoga mobilis | Mayol O, David S, Darii E, Debard A, Mariage A, Pellouin V, Petit JL, Salanoubat M, de Berardinis V, Zaparucha A and Vergne-Vaxelaire C | | | | Decoding the oak genome: public release of sequence data, assembly, annotation and publication strategies | Plomion C, Aury JM, Amselem J, Alaeitabar T, Barbe V, Belser C, Berges H, Bodenes C, Boudet N, Boury C, Canaguier A, Couloux A, Da Silva C, Duplessis S, Ehrenmann F, Estrada-Mairey B, Fouteau S, Francillonne N, Gaspin C, Guichard C, Klopp C, Labadie K, Lalanne C, Le Clainche I, Leple JC, Le Provost G, Leroy T, Lesur I, Martin F, Mercier J, Michotey C, Murat F, Salin F, Steinbach D, Faivre-Rampant P, Wincker P, Salse J, Quesneville H and Kremer A | | | | Toolbox for Protein Structure Prediction | | | | | Genome Mining for Innovative Biocatalysts: New Dihydroxyacetone Aldolases for the Chemist's Toolbox | Guerard-Helaine C, de Berardinis V, Besnard-Gonnet M, Darii E, Debacker M, Debard A, Fernandes C, Helaine V, Mariage A, Pellouin V, Perret A, Petit JL, Sancelme M, Lemaire M and Salanoubat M | | | | Genome and Transcriptome of Clostridium phytofermentans, Catalyst for the Direct Conversion of Plant Feedstocks to Fuels | Petit E, Coppi MV, Hayes JC, Tolonen AC, Warnick T, Latouf WG, Amisano D, Biddle A, Mukherjee S, Ivanova N, Lykidis A, Land M, Hauser L, Kyrpides N, Henrissat B, Lau J, Schnell DJ, Church GM, Leschine SB and Blanchard JL | | | | An assessment of the amount of untapped fold level novelty in under-sampled areas of the tree of life | | | | | The enzymatic nature of an anonymous protein sequence cannot reliably be inferred from superfamily level structural information alone | | | | | Fungal lysis by a soil bacterium fermenting cellulose | Tolonen AC, Cerisy T, El-Sayyed H, Boutard M, Salanoubat M and Church GM | | | | Physiology, Genomics, and Pathway Engineering of an Ethanol-Tolerant Strain of Clostridium phytofermentans | Tolonen AC, Zuroff TR, Ramya M, Boutard M, Cerisy T and Curtis WR | | | | Revealing the hidden functional diversity of an enzyme family | Bastard K, Smith AAT, Vergne-Vaxelaire C, Perret A, Zaparucha A, De Melo-Minardi R, Mariage A, Boutard M, Debard A, Lechaplais C, Pelle C, Pellouin V, Perchat N, Petit JL, Kreimeyer A, Medigue C, Weissenbach J, Artiguenave F, De Berardinis V, Vallenet D and Salanoubat M | | | | Synthesis of Mono- and Dihydroxylated Amino Acids with New alpha-Ketoglutarate-Dependent Dioxygenases: Biocatalytic Oxidation of C-H Bonds | Baud D, Saaidi PL, Monfleur A, Harari M, Cuccaro J, Fossey A, Besnard M, Debard A, Mariage A, Pellouin V, Petit JL, Salanoubat M, Weissenbach J, de Berardinis V and Zaparucha A | | | | Large alpha-aminonitrilase activity screening of nitrilase superfamily members: Access to conversion and enantiospecificity by LC-MS | Bordier F, Stam M, Darii E, Tricot S, Fossey A, Rohault J, Debard A, Mariage A, Pellouin V, Petit JL, Perret A, Vallenet D, Salanoubat M, Weissenbach J, Vergne-Vaxelaire C, de Berardinis V and Zaparucha A | | | | Validation of RetroPath, a computer-aided design tool for metabolic pathway engineering | Feher T, Planson AG, Carbonell P, Fernandez-Castane A, Grigoras I, Dariy E, Perret A and Faulon JL | | | | Draft Genome Sequence of Propane- and Butane-Oxidizing Actinobacterium Rhodococcus ruber IEGM 231 | Ivshina IB, Kuyukina MS, Krivoruchko AV, Barbe V and Fischer C | | | | An integrated catalog of reference genes in the human gut microbiome | Li J, Jia H, Cai X, Zhong H, Feng Q, Sunagawa S, Arumugam M, Kultima JR, Prifti E, Nielsen T, Juncker AS, Manichanh C, Chen B, Zhang W, Levenez F, Wang J, Xu X, Xiao L, Liang S, Zhang D, Zhang Z, Chen W, Zhao H, Al-Aama JY, Edris S, Yang H, Wang J, Hansen T, Nielsen HB, Brunak S, Kristiansen K, Guarner F, Pedersen O, Dore J, Ehrlich SD, Bork P, Wang J and Meta HITC | | | | Stereochemistry and Conformation of Skyllamycin, a Non-Ribosomally Synthesized Peptide from Streptomyces sp Acta 2897 | Schubert V, Di Meo F, Saaidi PL, Bartoschek S, Fiedler HP, Trouillas P and Sussmuth RD | | | | Novel metabolic features in Acinetobacter baylyi ADP1 revealed by a multiomics approach | Stuani L, Lechaplais C, Salminen AV, Segurens B, Durot M, Castelli V, Pinet A, Labadie K, Cruveiller S, Weissenbach J, de Berardinis V, Salanoubat M and Perret A | | | | Quantitative proteomics using reductive dimethylation for stable isotope labeling | | | | | Synthetic biology and society: the point of view of students who took part of the iGEM competition - a scientific's view | | | | | The ModFOLD4 server for the quality assessment of 3D protein models | McGuffin LJ, Buenavista MT and Roche DB | | | | The FunFOLD2 server for the prediction of protein-ligand interactions | Roche DB, Buenavista MT and McGuffin LJ | | | | Nitrilase Activity Screening on Structurally Diverse Substrates: Providing Biocatalytic Tools for Organic Synthesis | Vergne-Vaxelaire C, Bordier F, Fossey A, Besnard-Gonnet M, Debard A, Mariage A, Pellouin V, Perret A, Petit JL, Stam M, Salanoubat M, Weissenbach J, De Berardinis V and Zaparucha A | | | | Endogeic earthworms shape bacterial functional communities and affect organic matter mineralization in a tropical soil | Bernard L, Chapuis-Lardy L, Razafimbelo T, Razafindrakoto M, Pablo AL, Legname E, Poulain J, Bruls T, O'Donohue M, Brauman A, Chotte JL and Blanchart E | | | | The Ectocarpus Genome and Brown Algal Genomics The Ectocarpus Genome Consortium | Cock JM, Sterck L, Ahmed S, Allen AE, Amoutzias G, Anthouard V, Artiguenave F, Arun A, Aury JM, Badger JH, Beszteri B, Billiau K, Bonnet E, Bothwell JH, Bowler C, Boyen C, Brownlee C, Carrano CJ, Charrier B, Cho GY, Coelho SM, Collen J, Le Corguille G, Corre E, Dartevelle L, Da Silva C, Delage L, Delaroque N, Dittami SM, Doulbeau S, Elias M, Farnham G, Gachon CMM, Godfroy O, Gschloessl B, Heesch S, Jabbari K, Jubin C, Kawai H, Kimura K, Kloareg B, Kuepper FC, Lang D, Le Bail A, Luthringer R, Leblanc C, Lerouge P, Lohr M, Lopez PJ, Macaisne N, Martens C, Maumus F, Michel G, Miranda-Saavedra D, Morales J, Moreau H, Motomura T, Nagasato C, Napoli CA, Nelson DR, Nyvall-Collen P, Peters AF, Pommier C, Potin P, Poulain J, Quesneville H, Read B, Rensing SA, Ritter A, Rousvoal S, Samanta M, Samson G, Schroeder DC, Scornet D, Segurens B, Strittmatter M, Tonon T, Tregear JW, Valentin K, Von Dassow P, Yamagishi T, Rouze P, Van de Peer Y, Wincker P and Consortium EG | | | | Proteome Adaptation to High Temperatures in the Ectothermic Hydrothermal Vent Pompeii Worm | Jollivet D, Mary J, Gagniere N, Tanguy A, Fontanillas E, Boutet I, Hourdez S, Segurens B, Weissenbach J, Poch O and Lecompte O | | | | Microbial urate catabolism: characterization of HpyO, a non-homologous isofunctional isoform of the flavoprotein urate hydroxylase HpxO | Michiel M, Perchat N, Perret A, Tricot S, Papeil A, Besnard M, de Berardinis V, Salanoubat M and Fischer C | | | | Annotation of microsporidian genomes using transcriptional signals | Peyretaillade E, Parisot N, Polonais V, Terrat S, Denonfoux J, Dugat-Bony E, Wawrzyniak I, Biderre-Petit C, Mahul A, Rimour S, Goncalves O, Bornes S, Delbac F, Chebance B, Duprat S, Samson G, Katinka M, Weissenbach J, Wincker P and Peyret P | | | | Genomic insights into strategies used by Xanthomonas albilineans with its reduced artillery to spread within sugarcane xylem vessels | Pieretti I, Royer M, Barbe V, Carrere S, Koebnik R, Couloux A, Darrasse A, Gouzy J, Jacques MA, Lauber E, Manceau C, Mangenot S, Poussier S, Segurens B, Szurek B, Verdier V, Arlat M, Gabriel DW, Rott P and Cociancich S | | | | 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